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Experimental Information Extraction from Nanocrystal Device Development Research Papers
24 Jun 2016 | Presentations | Contributor(s): Thaer Dieb
Nano WG weekly meeting: Dr. Thaer M. Dieb, National Institute for Material Science, Graduate School of Frontier Sciences, University of Tokyo Seminar on development of an annotated corpus for nanocrystal device research papers and automatic information extraction framework...
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Text Mining, Data Mining and Molecular Dynamics Simulations for in Silico Design of PAMAM Dendrimers
17 Jun 2016 | Presentations | Contributor(s): Julio Facelli
Nano WG June 16, 2016 Text Mining, Data Mining and Molecular Dynamics Simulations for in Silico Design of PAMAM Dendrimers by Julio Facelli
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Nanoinformatics: research and education
17 Jun 2016 | Presentations | Contributor(s): Victor Maojo
Nano WG June 2, 2016. Text mining of nanotoxicity literature (Victor Maojo)
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Hunting for Opportunities: Nano-Enabled Drug Delivery to Treat Cancers
26 May 2016 | Presentations | Contributor(s): Alan Porter, Mervi Heiskanen
Within the scope of ongoing nano informatics by our Georgia Tech group, we have analyzed Nano-Enabled Drug Delivery (NEDD) research publication and patent activity. Here, I report on work led by Jing Ma exploring A) which nano components are helping deliver which B) drugs, to treat...
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Data Management: The appproach in NANoREG and ProSafe
21 Apr 2016 | Presentations | Contributor(s): Sara Totaro, Hugues Crutzen
NANoREG project is working on establishing a common European approach to the regulatory testing of Manufactured Nanomaterials and ProSafe has been designed to coordinate and support the aims of EU member and associated states in their EU and international efforts regarding risk assessment,...
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InChl and Nanoparticles
21 Apr 2016 | Presentations | Contributor(s): Steve Heller
The InChI Trust is a nonprofit charity which works to develop and promote the use of the IUPAC InChI open-source chemical structure representation algorithm. The InChI with its associated InChIKey was developed as a non-proprietary international standard to represent chemical structures and has...
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Nano WG: NCI's Alliance for Nanotechnology in Cancer Program: Phase III and Data Sharing Plans
18 Feb 2016 | Presentations | Contributor(s): Stephanie Morris
Launched in 2004, the National Cancer Institute (NCI) Alliance for Nanotechnology in Cancer (Alliance) advanced a number of promising nanotechnologies for the diagnosis, treatment and prevention of cancer in its first ten years. This progress led NCI to announce in September 2015 its continued...
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Nanomaterial-Biological Interactions Knowledgebase
21 Jan 2016 | Presentations | Contributor(s): Stacey L Harper
Nano WG January 14, 2016 The NBI Knowledgebase is intended to offer industry, academia, the general public, and regulatory agencies a mechanism to rationally inquire for unbiased interpretation of nanomaterial exposure effects in biological systems. The knowledgebase serves as a repository for...
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Data Collection from the Nanotoxicology Literature Using ISA-TAB-Nano
21 Jan 2016 | Presentations | Contributor(s): Richard Liam Marchese Robinson
Nano WG meeting January 21, 2016 This is an updated version of the talk originally delivered at the CompNanoTox2015 conference. [1] Marchese Robinson, R.; Richarz, A.N.; Cassano, A.; Cronin, M.T.D; Rallo, R. (2015): Data Collection from the Nanotoxicology Literature Using ISA-TAB-Nano. FigShare....
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Materials Science Data Management Initiatives at NIST
17 Dec 2015 | Presentations | Contributor(s): Robert J. Hanisch
Nano WG December 17, 2015 •NIST is a national and world resource for fundamental data •Access should be easy and open –With regard to IP and privacy issues •As our nation’s standards organization… –NIST should be a leader in national and...
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The Open Scholarship Initiative (OSI)
17 Dec 2015 | Presentations | Contributor(s): Glenn Hampson
Nano WG meeting November 19, 2015. : "What should the future of scholarly publishing look like? How about open access? Who should decide? Can journals become more affordable and accessible? Will journals continue to serve as the primary means of communicating research? Can institutional...
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Nanomaterial Registry Update
22 Oct 2015 | Presentations | Contributor(s): Karmann Mills, Anthony Hickey, Alexander Tropsha
Nano WG weekly meeting October 22,2015
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UCSC Biomedical Evidence Graph Demonstration
03 Jun 2015 | Presentations | Contributor(s): Josh Stuart, ellrott
The BMEG demonstration includes the following elements: 1) Organization of crowd-source challenges to develop best-of-breed methods including an overview of current DREAM projects, living benchmarks; 2) Enabling cloud-ready methods for mass compute with examples of recently...
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Seven Bridges Cancer Genomics Cloud Pilot TCGA 2015 symposium workshop presentation
23 May 2015 | Presentations | Contributor(s): Deniz Kural
Basic and translational cancer research creates the need to disseminate, manage, and interpret large heterogeneous datasets. The volume and complexity of the data now routinely generated by high-throughput technologies has become too costly for individual laboratories and many research...
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Video: Learn how TIES can help manage research resources
16 Jan 2015 | Presentations | Contributor(s): Girish Chavan, Rebecca Crowley
https://www.youtube.com/watch?v=EzjAo9LJ4tg
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CRAVAT Introduction Video - Cancer Related Analysis of Variants
03 Dec 2014 | Teaching Materials | Contributor(s): Michael C Ryan
This video provides a brief overview of the CRAVAT web service(http://www.cravat.us/). CRAVAT provides annotation and analysis of cancer mutations. CRAVAT is free, very easy to use, and can handle large volumes of mutations.[[Youtube(xovmIy11Bcs)]]Please switch to 1080 resolution and watch...
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Talking Science: Designing and Delivering Successful Oral Presentations
18 Sep 2014 | Downloads | Contributor(s): Shawn Mullen
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Tips for creating Standards Group Pages
22 May 2014 | Teaching Materials | Contributor(s): Denise Warzel
The Standards Portal offers a way to organize dsicussions and resources related to a set of standards. The organizing construct can be either a community interested in sharing data or using common tools, or by a particular type of standard, for example demographics or biomarkers. An example of a...
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Getting Started at the Standards Portal Pilot
27 Mar 2014 | Teaching Materials | Contributor(s): Denise Warzel, Ann Christine Catlin
The Standards Portal Pilot is now available! (Click the link for the portal home page.)Why use the standards portal? See more information about its genesis and use cases in a study conducted for the VCDE caBIG community here. If you are participating in the Pilot, please join the...
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Standards Portal CRFs Complete View
19 Mar 2014 | Downloads | Contributor(s): Denise Warzel, Sumudinie fernando, Ann Christine Catlin
This DataView resource page is for the Standards Portal CRFsUse this DataView to browse,search, explore and download the complete set of columns for NCI case report form standards at the Hub. These CRFs were brought to the Hub for clarification, discussion and discovery. They were assembled by...