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  1. CWIG_Nov08th2020_PathOS_Recording

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    04 Nov 2020

  2. CWIG_Oct09th2020_Tibanna_SooLee_Recording

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    04 Nov 2020

  3. CWIG_OCT11th2020_JohannesKoster-Recording

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    04 Nov 2020

  4. CWIG_Oct152019_PDCIntegrationSBG_Slides

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    04 Nov 2020

  5. CWIG_Sept11th2020_Avi Ma'ayan_Recording

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    04 Nov 2020

  6. CWIG_Sept13th2019_McKerrow_IntegratingMultiOmics_Slides

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    04 Nov 2020

  7. CWIG_Sept13th2019_SBG_Recording

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    04 Nov 2020

  8. HUBzero: A platform for dissemination and collaboration in Computational Science and Engineering

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    07 Aug 2015 | Contributor(s): Michael McLennan, Rick Kennell

    The HUBzero cyberinfrastructure lets scientific researchers work together online to develop tools. Other researchers can then access the resulting tools using an ordinary Web browser and launch simulation runs on the national Grid infrastructure, without having to download or...

  9. HUBzero: A Web-based Platform for research, Education and Scientific Collaboration

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    11 Sep 2013 | Presentations | Contributor(s): Michael McLennan

    Imagine an app store for scientists, engineers, and educators filled with simulation and modeling tools — not simple Java applets, but real research codes that tackle difficult problems and may require substantial computing power drawn from the Cloud. Imagine a new way of publishing...

  10. ITCR Monthly Teleconference September 4, 2015

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    07 Oct 2015 | Presentations | Contributor(s): Juli Klemm

     

  11. Next-Generation Clustered Heat Maps (NG-­CHM)

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    07 Oct 2015 | Presentations | Contributor(s): Weinstein John, Bradley Broom

    Clustered Heat Maps (CHMs) have been referred to as the ubiquitous visual icons of post-genomic biology -- the most frequent type of visualization for large molecular profiling databases. However, “traditional” CHMs are static images -- a serious limitation. Accordingly, we have now...

  12. October 2021 CWIG Webinar Slides - Arun Isaac

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    27 Dec 2021 | Downloads | Contributor(s): Alan Zheng

  13. October 2021 CWIG Webinar Slides - Pjotr Prins

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    27 Dec 2021 | Downloads | Contributor(s): Alan Zheng

  14. Open source diffusion MRI technology for brain cancer research

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    07 Oct 2015 | Presentations | Contributor(s): Lauren O\'Donnell

    Using measurements of water diffusion, dMRI can give unique insights into the microstructure and cellular orientation of tissues. There is a growing awareness in the neurosurgery community that diffusion models must move beyond the current clinical standard of the diffusion tensor for better...

  15. Overview on HUBzero - Building Scientific Communities Online

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    03 Sep 2013 | Teaching Materials | Contributor(s): Michael McLennan

    This is a white paper/publication on the HUB and how one can build online communities using the HUBzero platform. See the tab on supporting documents for a video presentation.

  16. Pathology Image Informatics Platform for visualization, analysis and management

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    07 Oct 2015 | Presentations | Contributor(s): Metin Gurcan, Anant Madabhushi, Anne Martel

    This multi-institutional proposal seeks to expand on an existing, freely available pathology image viewer (Sedeen Image Viewer) to create a pathology informatics platform (PIIP) for managing, annotating, sharing, and quantitatively analyzing digital Pathology Imaging (DPI) data. Sedeen has become...

  17. QIN HUBzero update

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    28 Oct 2013 | Teaching Materials | Contributor(s): Jayashree Kalpathy-Cramer

    presentation for the QIN EC meeting 10/21/2013

  18. September 2021 CWIG Webinar Slides - Junjun Zhang

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    27 Dec 2021 | Presentations | Contributor(s): Alan Zheng

  19. Seven Bridges Cancer Genomics Cloud Pilot TCGA 2015 symposium workshop presentation

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    23 May 2015 | Presentations | Contributor(s): Deniz Kural

    Basic and translational cancer research creates the need to disseminate, manage, and interpret large heterogeneous datasets. The volume and complexity of the data now routinely generated by high-throughput technologies has become too costly for individual laboratories and many research...

  20. The Cancer Genomics Cloud powered by Seven Bridges: a secure and scalable cloud-based platform to access, share and analyze multi-omics datasets

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    18 May 2021 | Presentations

    The Cancer Genomics Cloud powered by Seven Bridges (CGC) is a NCI-funded cloud resource that provides a unified platform for cancer data analysis by co-localizing three components within the cloud: 1) large cancer datasets including TCGA, CPTAC and several others from CRDC data nodes; 2) >500...