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  1. CWIG_May10th2020_RedHat_Recording

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    04 Nov 2020

  2. CWIG_Nov08th2019_Pathos_Doig_Slides

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    04 Nov 2020

  3. CWIG_Nov08th2020_PathOS_Recording

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    04 Nov 2020

  4. CWIG_Oct09th2020_Tibanna_SooLee_Recording

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    04 Nov 2020

  5. CWIG_OCT11th2020_JohannesKoster-Recording

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    04 Nov 2020

  6. CWIG_Oct152019_PDCIntegrationSBG_Slides

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    04 Nov 2020

  7. CWIG_Sept11th2020_Avi Ma'ayan_Recording

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    04 Nov 2020

  8. CWIG_Sept13th2019_McKerrow_IntegratingMultiOmics_Slides

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    04 Nov 2020

  9. CWIG_Sept13th2019_SBG_Recording

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    04 Nov 2020

  10. Integrated analysis of breast cancer cell lines reveals unique signaling pathways

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    16 Sep 2014 | Contributor(s): Laura M Heiser, Nicholas J Wang, Carolyn L Talcott, Keith R Laderoute, Merrill Knapp, Yinghui Guan, Zhi Hu, Safiyyah Ziyad, Barbara L Weber, Sylvie Laquerre, Jeffrey R Jackson, Richard F Wooster, Wen Lin Kuo, Joe W Gray, Paul T Spellman

    AbstractBackgroundCancer is a heterogeneous disease resulting from the accumulation of genetic defects that negatively impact control of cell division, motility, adhesion and apoptosis. Deregulation in signaling along the EgfR-MAPK pathway is common in breast cancer, though the manner in which...

  11. Integrative Cancer Biology Program Datasets

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    26 Apr 2016 | Series | Contributor(s): Jonathan Bistline, Michael Reich

    The NCI-ICBP promotes an integrative/systems approach to the study of cancer biology. The Program encourages scientists to study cancer as a complex biological system. Information gained from these studies are used to build reliable and testable predictive computation models of cancer processes...

  12. ITCR Monthly Teleconference September 4, 2015

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    07 Oct 2015 | Presentations | Contributor(s): Juli Klemm

     

  13. LBL ICBP50 integrative genomic data

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    13 Nov 2014 | Downloads | Contributor(s): Joe Gray, Jonathan Bistline

    From Joe Gray, Lawrence Berkeley National Laboratory.  There are seventeen (17) files in this study: Affymetrix U133A gene expression data (icbp_u133a.gct) Affymetrix U133A gene expression data (ICBP_U133a.zip) Affymetrix splice junction exon-exon data (ICBP_Junction.zip) Affymetrix...

  14. Next-Generation Clustered Heat Maps (NG-­CHM)

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    07 Oct 2015 | Presentations | Contributor(s): Weinstein John, Bradley Broom

    Clustered Heat Maps (CHMs) have been referred to as the ubiquitous visual icons of post-genomic biology -- the most frequent type of visualization for large molecular profiling databases. However, “traditional” CHMs are static images -- a serious limitation. Accordingly, we have now...

  15. October 2021 CWIG Webinar Slides - Arun Isaac

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    27 Dec 2021 | Downloads | Contributor(s): Alan Zheng

  16. October 2021 CWIG Webinar Slides - Pjotr Prins

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    27 Dec 2021 | Downloads | Contributor(s): Alan Zheng

  17. Open source diffusion MRI technology for brain cancer research

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    07 Oct 2015 | Presentations | Contributor(s): Lauren O\'Donnell

    Using measurements of water diffusion, dMRI can give unique insights into the microstructure and cellular orientation of tissues. There is a growing awareness in the neurosurgery community that diffusion models must move beyond the current clinical standard of the diffusion tensor for better...

  18. Pathology Image Informatics Platform for visualization, analysis and management

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    07 Oct 2015 | Presentations | Contributor(s): Metin Gurcan, Anant Madabhushi, Anne Martel

    This multi-institutional proposal seeks to expand on an existing, freely available pathology image viewer (Sedeen Image Viewer) to create a pathology informatics platform (PIIP) for managing, annotating, sharing, and quantitatively analyzing digital Pathology Imaging (DPI) data. Sedeen has become...

  19. Screening for Small Molecules: Target Discovery Against miRNAs for Breast Cancer Treatment

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    18 Aug 2015 | Presentations | Contributor(s): Odemaris Narvaez del Pilar

    Breast cancer is one of the leading causes of cancer related deaths and morbidity among women worldwide. Identifying new targets and developing new therapies is very important in order to improve patient outcomes and minimize this health burden. MicroRNAs, a type of non-coding RNA, are potential...

  20. September 2021 CWIG Webinar Slides - Junjun Zhang

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    27 Dec 2021 | Presentations | Contributor(s): Alan Zheng