LBL ICBP50 integrative genomic data
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Abstract
From Joe Gray, Lawrence Berkeley National Laboratory. There are seventeen (17) files in this study:
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Affymetrix U133A gene expression data (icbp_u133a.gct)
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Affymetrix U133A gene expression data (ICBP_U133a.zip)
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Affymetrix splice junction exon-exon data (ICBP_Junction.zip)
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Affymetrix Human Exon 1.0 ST exon array data (ICBP_Exon.zip)
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Affymetrix SNP 6.0 data (ICBP_SNP6_GZ.zip)
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MAGE-TAB Sample Annotation junction array scan (lbnl_breastcancercelllines_junctionarray_mage-tab.txt)
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MAGE-TAB Sample Annotation exon array scan (lbnl_breastcancercelllines_exonarray_mage-tab.txt)
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MAGE-TAB Sample Annotation SNP6 scan (lbnl_breastcancercelllines_snp6_mage-tab.txt)
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MAGE-TAB Sample Annotation U133 gene expression scan (lbnl_breastcancercelllines_u133a_mage-tab.txt)
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Combined Sample Annotation (icbp_snp6_sampleannotation.txt)
Mapping between expression, junction, exon, and SNP scan names -
GISTIC Results (Amp_genes.txt)
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GISTIC Results (Del_genes.txt)
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GISTIC Results (alf.txt)
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GISTIC Results (all_lesions_file.txt)
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GISTIC Results (scores.gistic.txt)
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GISTIC Results (marker.txt)
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GISTIC Results (081708-all-samples-names-DNAcopy-output.txt)
These datasets have been exported from the Broad Institute's ICBP Data & Analysis Portal.
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