All Categories (21-40 of 48)

1. Tools for Creation of Integrated Data Repository for Cancer Research

   out of 5 stars 

   16 Jun 2015 | | Contributor(s):: Guoqian Jiang

   Admin Supplement Proposal Parent Projects: DeepPhe (PIs: Savova and Jacobson) caCDE-QA (PI: Jiang)

2. A Semantic Web-based Quality Assurance Tool for Cancer Study Common Data Elements

   out of 5 stars 

   16 Jun 2015 | | Contributor(s):: Guoqian Jiang

   A poster presentation from the caCDE-QA project (PI: Jiang)  

3. Notes from the ITCR Annual Meeting May 27-28, 2015

   out of 5 stars 

   10 Jun 2015 | | Contributor(s):: Ishwar Chandramouliswaran, Juli Klemm

   Notes from the ITCR Annual Meeting May 27-28, 2015

4. CRAVAT - Cancer-Related Analysis of Variants

   Collections | 21 Apr 2015 | Posted by Michael C Ryan

   https://ncihub.cancer.gov/groups/itcr/collections/itcr-training-assets

5. Introduction to the Trinity Cancer Transcriptome Analysis Toolkit

   Collections | 13 Apr 2015 | Posted by Brian Haas

   https://ncihub.cancer.gov/groups/itcr/collections/itcr-training-assets

6. Apache cTAKES

   Collections | 13 Apr 2015 | Posted by cTakes ApacheNlp

   https://ncihub.cancer.gov/groups/itcr/collections/itcr-training-assets

7. TIES and the TIES Cancer Research Network

   Collections | 13 Apr 2015 | Posted by Rebecca Crowley

   https://ncihub.cancer.gov/groups/itcr/collections/itcr-training-assets

8. NDEx - The Network Data Exchange

   Collections | 10 Apr 2015 | Posted by Rudolf T Pillich

   https://ncihub.cancer.gov/groups/itcr/collections/itcr-training-assets

9. UCSC Xena: Explain it to me!

   Collections | 10 Apr 2015 | Posted by Mary Goldman

   https://ncihub.cancer.gov/groups/itcr/collections/itcr-training-assets

10. MeV

    Collections | 25 Mar 2015 | Posted by Ishwar Chandramouliswaran

    https://ncihub.cancer.gov/groups/itcr/collections/itcr-training-assets

11. Cistrome Analysis Pipeline

    Collections | 25 Mar 2015 | Posted by Ishwar Chandramouliswaran

    https://ncihub.cancer.gov/groups/itcr/collections/itcr-training-assets

12. 3D Slicer

    Collections | 26 Feb 2015 | Posted by Andrey Fedorov

    https://ncihub.cancer.gov/groups/itcr/collections/itcr-training-assets

13. Introduction to the Trinity Cancer Transcriptome Analysis Toolkit

    out of 5 stars 

    05 Feb 2015 | | Contributor(s):: Brian Haas, Aviv Regev, Bill Barnett

    This short video provides an overview of our ITCR-funded effort to leverage RNA-Seq and de novo transcriptome assembly to assist researchers in studying cancer transcriptomes.  Visit our NCGAS Trinity/Galaxy portal to access these compute...

14. CRAVAT Introduction Video - Cancer Related Analysis of Variants

    out of 5 stars 

    03 Dec 2014 | | Contributor(s):: Michael C Ryan

    This video provides a brief overview of the CRAVAT web service(http://www.cravat.us/).  CRAVAT provides annotation and analysis of cancer mutations. CRAVAT is free, very easy to use, and can handle large volumes of mutations.[[Youtube(xovmIy11Bcs)]]Please switch to 1080 resolution and watch...

15. Analysis, integration and visualization of DNA methylation sequencing data

    out of 5 stars 

    07 Nov 2014 | | Contributor(s):: Maureen Sartor

    Integrative epigenomic/genomic profiling and biomarker discovery of HPV+ and HPV- squamous cancers.

16. Summarization of Big Data

    out of 5 stars 

    07 Nov 2014 | | Contributor(s):: Jeffrey A. Blimes

    All about assay selection...

17. Biomedical Evidence Graph

    out of 5 stars 

    03 Oct 2014 | | Contributor(s):: Josh Stuart

18. Tools to Analyze Morphology and Spatially Mapped Molecular Data

    out of 5 stars 

    03 Oct 2014 | | Contributor(s):: Joel Saltz

19. Bioconductor help / training / outreach resources

    Collections | 17 Sep 2014 | Posted by Martin Morgan

    https://ncihub.cancer.gov/groups/itcr/collections/itcr-training-assets

20. ITCR PI Meeting June 2014 Presentations

    out of 5 stars 

    23 Jun 2014 |

    Informatics Technology for Cancer Research (ITCR) Initiative held its Annual PI Meeting on June 12-13, 2014 in Rockville, MD. This series contains the presentations given at the meeting.