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  1. CWIG_Sept13th2019_McKerrow_IntegratingMultiOmics_Slides

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    04 Nov 2020

  2. CWIG_April10th2020_CancerDataAnalytics_ISB-CGC

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    04 Nov 2020

  3. CWIG_February14th2020_Fecho_Wang_ROBOKOP_Slides

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    04 Nov 2020

  4. CWIG_March13th2020_Evans_MGH_ContainersPipeline_Slides

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    04 Nov 2020

  5. CWIG_June12th2020_Neumann_Moreno_Slides

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    04 Nov 2020

  6. CWIG_Oct152019_PDCIntegrationSBG_Slides

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    04 Nov 2020

  7. CWIG_May08th2020-DavidGodlove_Slides

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    04 Nov 2020

  8. CWIG_December 13th, 2019:BenBusby_Slides

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    04 Nov 2020

  9. CWIG-20201009 Recording

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    13 Oct 2020 | Presentations | Contributor(s): Durga Addepalli, Dr. Soo Lee

  10. Pathology Image Informatics Platform for visualization, analysis and management

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    07 Oct 2015 | Presentations | Contributor(s): Metin Gurcan, Anant Madabhushi, Anne Martel

    This multi-institutional proposal seeks to expand on an existing, freely available pathology image viewer (Sedeen Image Viewer) to create a pathology informatics platform (PIIP) for managing, annotating, sharing, and quantitatively analyzing digital Pathology Imaging (DPI) data. Sedeen has become...

  11. Next-Generation Clustered Heat Maps (NG-­CHM)

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    07 Oct 2015 | Presentations | Contributor(s): Weinstein John, Bradley Broom

    Clustered Heat Maps (CHMs) have been referred to as the ubiquitous visual icons of post-genomic biology -- the most frequent type of visualization for large molecular profiling databases. However, “traditional” CHMs are static images -- a serious limitation. Accordingly, we have now...

  12. Open source diffusion MRI technology for brain cancer research

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    07 Oct 2015 | Presentations | Contributor(s): Lauren O\'Donnell

    Using measurements of water diffusion, dMRI can give unique insights into the microstructure and cellular orientation of tissues. There is a growing awareness in the neurosurgery community that diffusion models must move beyond the current clinical standard of the diffusion tensor for better...

  13. ITCR Monthly Teleconference September 4, 2015

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    07 Oct 2015 | Presentations | Contributor(s): Juli Klemm

     

  14. Brain Cancer Imaging Analytics

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    02 Oct 2015 | Presentations | Contributor(s): Christos Davatzikos

    The transition of oncologic imaging from its “industrial era” to it is “information era” demands analytical methods that 1) extract information from this data that is clinically and biologically relevant; 2) integrate imaging, clinical, and genomic data via rigorous...

  15. Tips for creating Standards Group Pages

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    22 May 2014 | Teaching Materials | Contributor(s): Denise Warzel

    The Standards Portal offers a way to organize dsicussions and resources related to a set of standards. The organizing construct can be either a community interested in sharing data or using common tools, or by a particular type of standard, for example demographics or biomarkers. An example of a...

  16. Getting Started at the Standards Portal Pilot

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    27 Mar 2014 | Teaching Materials | Contributor(s): Denise Warzel, Ann Christine Catlin

    The Standards Portal Pilot is now available! (Click the link for the portal home page.)Why use the standards portal? See more information about its genesis and use cases in a study conducted for the VCDE caBIG community here. If you are participating in the Pilot, please join the...

  17. Standards Portal CRFs Complete View

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    19 Mar 2014 | Downloads | Contributor(s): Denise Warzel, Sumudinie fernando, Ann Christine Catlin

    This DataView resource page is for the Standards Portal CRFsUse this DataView to browse,search, explore and download the complete set of columns for NCI case report form standards at the Hub. These CRFs were brought to the Hub for clarification, discussion and discovery. They were assembled by...

  18. Standards Portal CDEs Common Data Fields

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    19 Mar 2014 | Downloads | Contributor(s): Denise Warzel, Sumudinie fernando, Ann Christine Catlin

    This DataView is for the Common Data Fields of the Standards Portal CDEsUse this DataView to browse, search, explore and download the essential set of columns for NCI common data elements standards at the Hub. These CDEs were brought to the Hub for clarification, discussion and discovery. They...

  19. Standards Portal CRFs Common Data Fields

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    19 Mar 2014 | Downloads | Contributor(s): Denise Warzel, Sumudinie fernando, Ann Christine Catlin

    This DataView is for the Common Data Fields of the Standards Portal CRFsUse this DataView to browse, search, explore and download the essential set of columns for NCI case report form standards at the Hub. These CRFs were brought to the Hub for clarification, discussion and discovery. They were...

  20. Why Use the Standards Portal at the Hub?

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    19 Mar 2014 | Teaching Materials | Contributor(s): Denise Warzel, Sumudinie fernando, Ann Christine Catlin

    The materials attached to this page were provided by Baris Suzek, who at the time was the Informatics Project Lead at the Innovation Center for Biomedical Informatics at Georgetown University School of Medicine. He conducted a study for the caBIG VCDE community to help clarify some of the...