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Introduction to the Trinity Cancer Transcriptome Analysis Toolkit
05 Feb 2015 | Contributor(s): Brian Haas, Aviv Regev, Bill Barnett
This short video provides an overview of our ITCR-funded effort to leverage RNA-Seq and de novo transcriptome assembly to assist researchers in studying cancer transcriptomes. Visit our NCGAS Trinity/Galaxy portal to access these compute...
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So What Can We Do With Nano Informatics? – Leveraging Decision Analytic Tools
22 Jan 2015 | Presentations | Contributor(s): Igor Linkov, Matthew Bates
Jan 22, 2015 meeting Nanotechnology Working Group Matthew E. Bates & Igor Linkov Risk & Decision Science Team Environmental Laboratory, Engineer Research and Development Center, US Army...
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Some Thoughts on Reproducibility
05 Dec 2014 | Presentations | Contributor(s): John Rumble
Nano WG December 4, 2014
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Some Thoughts on Reproducibility
05 Dec 2014 | Presentations | Contributor(s): John Rumble
Nano WG December 4, 2014
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Data, Metadata and "Data Quality" for Databases
05 Dec 2014 | Presentations | Contributor(s): Frederick C. Klaessig, Mervi Heiskanen
Nano WG December 4, 2014
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Data, Metadata and "Data Quality" for Databases
05 Dec 2014 | Presentations | Contributor(s): Frederick C. Klaessig, Mervi Heiskanen
Nano WG December 4, 2014
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Data ReproducibilityNanotechnology Knowledge Infrastructure Data Curation
05 Dec 2014 | Presentations | Contributor(s): Martin Fritts
Nano WG presentation on December 4, 2014
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Data ReproducibilityNanotechnology Knowledge Infrastructure Data Curation
05 Dec 2014 | Presentations | Contributor(s): Martin Fritts
Nano WG presentation on December 4, 2014
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Multiclass cancer diagnosis using tumor gene expression signatures
10 Nov 2014 | Downloads
Experiment Description: The optimal treatment of patients with cancer depends on establishing accurate diagnoses by using a complex combination of clinical and histopathological data. In some instances, this task is difficult or impossible because of atypical clinical...
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Overview of the National Cancer Institute (NCI) Nanotechnology Characterizaton Laboratory (NCL)
03 Nov 2014 | Presentations | Contributor(s): Jennifer Hall Grossman
Working in concert with the National Institute of Standards and Technology (NIST) and the U.S. Food and Drug Administration (FDA), the National Cancer Institute (NCI) established the Nanotechnology Characterization Laboratory to perform preclinical efficacy and toxicity testing of...
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caNanoLab Data Portal Presentation
25 Sep 2014 | Presentations | Contributor(s): Sharon Gaheen
caNanoLab is a data sharing portal designed to facilitate information sharing across the international biomedical nanotechnology research community to expedite and validate the use of nanotechnology in biomedicine. caNanoLab provides support for the annotation of nanomaterials with...
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Environmental Consequences of Nanotechnologies
11 Sep 2014 | Presentations | Contributor(s): Jeffrey Steevens, Alan Kennedy, Jessica Coleman, Zach Collier, Aimee Poda, Charles Weiss, Mark Widder, Jonathan Stallings, Robert Moser
Jeffery A Steevens, Senior ScientistAlan Kennedy, Jessica Coleman, Zach Collier, Robert Moser, Aimee Poda, Charles WeissUS Army ERDCMark Widder and MAJ Jonathan StallingsUS Army Center for Environmental Health ResearchPresentation to NCI - Nanotechnology Working Group 11 September 2014
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An ISA-TAB Nano compliant data management system for nanosafety modelling
10 Sep 2014 | Presentations | Contributor(s): Robert Rallo
Dr. Robert RalloAssociate Professor , Universitat Rovira i Virgili, Departament d'Enginyeria Informàtica i MatemàtiquesTarragona, SpainNano WG presentation July 10, 2014[[Image(<Capture.PNG>)]]
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Design and Applications of the CEINT Database
10 Sep 2014 | Presentations | Contributor(s): Sandra Karcher, Yuan Tian
Nano WG presentation September 4, 2014Post-doctoral research associates Dr. Sandra Karcher and Dr. Yuan Tian, Duke University
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Considerations of relevance vs reliability and know vs show for CLEAR communication and how they relate to issues for nanotechnology, including the data-readiness levels
09 Sep 2014 | Presentations | Contributor(s): Stacey L Harper, Mark D Hoover
Presentation for the Nano WG 4.24. 2014
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Data Readi
13 Aug 2014 | Teaching Materials | Contributor(s): Lisa E Friedersdorf
Nanotechnology Signature InitiativeNanotechnology Knowledge Infrastructure (NKI):Enabling National Leadership in Sustainable DesignDraft Discussion Document: May 9, 2013
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Nanocuration update by Christine Hendren
02 Jun 2014 | Presentations | Contributor(s): Christine Ogilvie Hendren
Nanocuration update by Christine Hendren, Nano WG May 29, 2014
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Informatics to enable Routine Personalized Cancer Therapy (IPCT)
18 Feb 2014 | Presentations | Contributor(s): Elmer V. Bernstam, Funda Meric-Bernstam
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Advanced Development of TIES - A Clinical Text Search Engine
18 Feb 2014 | Presentations | Contributor(s): Rebecca Crowley
Archived human tissues are an essential resource for translational research. Formalin-fixed, paraffin-embedded (FFPE) tissues from cancer patients are used in a wide range of assays, including RT-PCR, SNP profiling, multiplex biomarkers, imaging biomarkers, targeted exome, whole exome, and whole...
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Informatics Tools for High-throughput Analysis of Cancer Mutations
15 Jan 2014 | Presentations | Contributor(s): Michael C Ryan, Rachel Karchin