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  1. QIN Software tools inventory summary

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    20 Jan 2015 | Downloads | Contributor(s): Andrey Fedorov

    Abstract QIN Tools survey has been conducted in two iterations starting from the Spring 2014 [1]. In the beginning of Summer 2014, a revised version of the survey has been released [2]. The results of the survey are available at [3], and also include the analysis of other data sources (such as...

  2. Video: Learn how TIES can help manage research resources

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    16 Jan 2015 | Presentations | Contributor(s): Girish Chavan, Rebecca Crowley

    https://www.youtube.com/watch?v=EzjAo9LJ4tg  

  3. Some Thoughts on Reproducibility

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    05 Dec 2014 | Presentations | Contributor(s): John Rumble

    Nano WG December 4, 2014

  4. Data, Metadata and "Data Quality" for Databases

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    05 Dec 2014 | Presentations | Contributor(s): Frederick C. Klaessig, Mervi Heiskanen

    Nano WG December 4, 2014

  5. Data Reproducibility Nanotechnology Knowledge Infrastructure Data Curation

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    05 Dec 2014 | Presentations | Contributor(s): Martin Fritts

    Nano WG presentation on December 4, 2014

  6. CRAVAT Introduction Video - Cancer Related Analysis of Variants

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    03 Dec 2014 | Teaching Materials | Contributor(s): Michael C Ryan

    This video provides a brief overview of the CRAVAT web service(http://www.cravat.us/).  CRAVAT provides annotation and analysis of cancer mutations. CRAVAT is free, very easy to use, and can handle large volumes of mutations.[[Youtube(xovmIy11Bcs)]]Please switch to 1080 resolution and watch...

  7. CRAVAT Introduction Video - Cancer Related Analysis of Variants

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    03 Dec 2014 | Teaching Materials | Contributor(s): Michael C Ryan

    This video provides a brief overview of the CRAVAT web service(http://www.cravat.us/).  CRAVAT provides annotation and analysis of cancer mutations. CRAVAT is free, very easy to use, and can handle large volumes of mutations.[[Youtube(xovmIy11Bcs)]]Please switch to 1080 resolution and watch...

  8. Analysis, integration and visualization of DNA methylation sequencing data

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    07 Nov 2014 | Presentations | Contributor(s): Maureen Sartor

    Integrative epigenomic/genomic profiling and biomarker discovery of HPV+ and HPV- squamous cancers.

  9. Summarization of Big Data

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    07 Nov 2014 | Presentations | Contributor(s): Jeffrey A. Blimes

    All about assay selection...

  10. CERR: A Computational Environment for Radiotherapy Research

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    28 Oct 2014 | External Applications | Contributor(s): Joseph Deasy

    CERR (pronounced 'sir') is a software platform for developing and sharing research results in radiation therapy treatment planning.CERR is written in the widely-used Matlab language (version 7.0 or later), allowing for low-cost development of visualization and analysis tools.CERR will...

  11. Quantitative Imaging Network(QIN) BIDS Related Tools

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    27 Oct 2014 | Downloads | Contributor(s): Andrey Fedorov, Thomas Casavant

    An inventory of the software tools used by the QIN sites to facilitate collaborative efforts such as sharing of analysis results and software tools.

  12. QIN Tools Inventory Summary

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    15 Oct 2014 | Teaching Materials | Contributor(s): Andrey Fedorov

    QIN Tools survey has been conducted in two iterations starting from the Spring 2014 [1]. In the beginning of Summer 2014, a revised version of the survey has been released [2]. The results of the survey are available at [3], and also include the analysis of other data sources (such as “QIN...

  13. Biomedical Evidence Graph

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    03 Oct 2014 | Presentations | Contributor(s): Josh Stuart

  14. Tools to Analyze Morphology and Spatially Mapped Molecular Data

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    03 Oct 2014 | Presentations | Contributor(s): Joel Saltz

  15. An ISA-TAB Nano compliant data management system for nanosafety modelling

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    10 Sep 2014 | Presentations | Contributor(s): Robert Rallo

    Dr. Robert RalloAssociate Professor , Universitat Rovira i Virgili, Departament d'Enginyeria Informàtica i MatemàtiquesTarragona, SpainNano WG presentation July 10, 2014[[Image(<Capture.PNG>)]]

  16. Design and Applications of the CEINT Database

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    10 Sep 2014 | Presentations | Contributor(s): Sandra Karcher, Yuan Tian

    Nano WG presentation September 4, 2014Post-doctoral research associates Dr. Sandra Karcher and Dr. Yuan Tian, Duke University

  17. ITCR PI Meeting June 2014 Presentations

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    23 Jun 2014 | Series

    Informatics Technology for Cancer Research (ITCR) Initiative held its Annual PI Meeting on June 12-13, 2014 in Rockville, MD. This series contains the presentations given at the meeting.

  18. Cloud Supercomputer Aided Diagnostic Imaging Decision Support System

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    18 Jun 2014 | Presentations | Contributor(s): Hiro Yoshida

    ITCR PI meeting presentation on project status.

  19. Data Acquisition Working Group

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    21 Apr 2014 | Presentations | Contributor(s): Tom Chenevert, Paul Kinahan

    DA-WG Update on PET-CT and DWI MRI

  20. Image Analysis and Performance Metrics WG - PET/CT Update

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    21 Apr 2014 | Presentations | Contributor(s): Jayashree Kalpathy-Cramer, Vyshak Chandra

    IAPM-WG PET/CT Update