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  1. Next-Generation Clustered Heat Maps (NG-­CHM)

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    07 Oct 2015 | Contributor(s): Weinstein John, Bradley Broom

    Clustered Heat Maps (CHMs) have been referred to as the ubiquitous visual icons of post-genomic biology -- the most frequent type of visualization for large molecular profiling databases. However, “traditional” CHMs are static images -- a serious limitation. Accordingly, we have now...

  2. Open source diffusion MRI technology for brain cancer research

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    07 Oct 2015 | Contributor(s): Lauren O\'Donnell

    Using measurements of water diffusion, dMRI can give unique insights into the microstructure and cellular orientation of tissues. There is a growing awareness in the neurosurgery community that diffusion models must move beyond the current clinical standard of the diffusion tensor for better...

  3. Overview of the NCI Cancer Research Data Commons, Genomic Data Commons (GDC), and NCI Cloud Resources

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    07 Jun 2018 | Presentations | Contributor(s): Tanja Davidsen, Mervi Heiskanen

    Nano WG presentation, June 7, 2018 by Tanja Davidsen, NCI CBIIT The Cancer Research Data Commons (CRDC) and NCI Cloud Resources overview.

  4. Pathology Image Informatics Platform for visualization, analysis and management

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    07 Oct 2015 | Presentations | Contributor(s): Metin Gurcan, Anant Madabhushi, Anne Martel

    This multi-institutional proposal seeks to expand on an existing, freely available pathology image viewer (Sedeen Image Viewer) to create a pathology informatics platform (PIIP) for managing, annotating, sharing, and quantitatively analyzing digital Pathology Imaging (DPI) data. Sedeen has become...

  5. So What Can We Do With Nano Informatics? – Leveraging Decision Analytic Tools

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    22 Jan 2015 | Presentations | Contributor(s): Igor Linkov, Matthew Bates

    Jan 22, 2015 meeting                  Nanotechnology Working Group Matthew E. Bates & Igor Linkov Risk & Decision Science Team Environmental Laboratory, Engineer Research and Development Center, US Army...

  6. Some Thoughts on Reproducibility

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    05 Dec 2014 | Presentations | Contributor(s): John Rumble

    Nano WG December 4, 2014

  7. Summarization of Big Data

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    07 Nov 2014 | Presentations | Contributor(s): Jeffrey A. Blimes

    All about assay selection...

  8. Support Access to NPO's Structure and Content

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    13 Aug 2015 | Presentations | Contributor(s): Michael Halper, Vladimir Ventura, Yehoshua Perl

    •Abstraction Networks (“AbNs”) for Ontologies•Two example AbNs:–Area taxonomy–Partial-area taxonomy•BLUOWL: taxonomy-based software tool•Application to the NPO•Conclusions

  9. Text Mining, Data Mining and Molecular Dynamics Simulations for in Silico Design of PAMAM Dendrimers

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    17 Jun 2016 | Presentations | Contributor(s): Julio Facelli

    Nano WG June 16, 2016 Text Mining, Data Mining and Molecular Dynamics Simulations for in Silico Design of PAMAM Dendrimers by Julio Facelli

  10. The impact of engineered nanomaterials on aquatic species: ISA-TAB compatible dataset mined from literature (2007-2016)

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    13 Jun 2017 | Presentations | Contributor(s): Anastasios Papadiamantis

    Nano WG presentation, June 8, 2017Primary scope of the project was to: Model the toxicity of engineered nanomaterials (ENMs) at multiple levels and design and create a database (DB) containing extracted peer-reviewed published toxicity dataAnalyse the extracted data and identify...

  11. The NANoREG Toolbox for the safety assessment of nanomaterials

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    16 Jan 2018 | Presentations | Contributor(s): Paula Jantunen

    Presentation for the Nano WG on January 11, 2018 by Paula Jantunen,  The European Commission’s science and knowledge service Joint Research Centre NANOoREG Toolbox supports the framework by identifying & inventorying tools for the different steps and options of...

  12. The Open Scholarship Initiative (OSI)

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    17 Dec 2015 | Presentations | Contributor(s): Glenn Hampson

    Nano WG meeting November 19, 2015. : "What should the future of scholarly publishing look like? How about open access? Who should decide? Can journals become more affordable and accessible? Will journals continue to serve as the primary means of communicating research? Can institutional...

  13. US-EU Nanoinformatics Roadmap Update

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    27 Jul 2016 | Presentations | Contributor(s): Frederick C. Klaessig

    US-EU Nanoinformatics Roadmap Update for the Nano WG on July 28, 2016

  14. Why in the world do we need a nanomaterials description system – How CODATA and VAMAS answers that question

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    12 Mar 2015 | Presentations | Contributor(s): John Rumble

    Nano WG March12, 2015