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eNanoMapper Ontology
14 Dec 2016 | Presentations | Contributor(s): Linda Rieswijk
Nano WG December 7, 2016 presentation by Linda Rieswijk (Maastricht University).Additional relevant links not included in the presentation:Tools to convert e.g. excel files into the enanomapper RDF format here http://ambit.sourceforge.net/enanomapper/templates/convertor.htmlCollection...
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Environmental Consequences of Nanotechnologies
11 Sep 2014 | Presentations | Contributor(s): Jeffrey Steevens, Alan Kennedy, Jessica Coleman, Zach Collier, Aimee Poda, Charles Weiss, Mark Widder, Jonathan Stallings, Robert Moser
Jeffery A Steevens, Senior ScientistAlan Kennedy, Jessica Coleman, Zach Collier, Robert Moser, Aimee Poda, Charles WeissUS Army ERDCMark Widder and MAJ Jonathan StallingsUS Army Center for Environmental Health ResearchPresentation to NCI - Nanotechnology Working Group 11 September 2014
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European Chemical Agency's work to implement REACH regulation for nanomaterials
04 May 2017 | Presentations | Contributor(s): Frank Le Curieux
Nano WG presentation on May 4, 2017. REACH = Registration, Evaluation, Authorisation (& restriction) of Chemicals aims to ensure a high level of protection of human health and the environment while enhancing competitiveness and innovation. Nano materials are covered by...
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European Open Science Cloud: Concept and opportunities
26 Mar 2019 | Presentations | Contributor(s): Gergely Sipos
EOSC-hub is a 33 million Euro H2020 project that started in January 2018 with the involvement of over 100 institutes. In three years the project establishes the first elements of the European Open Science Cloud (EOSC) – the infrastructure aimed to accelerate and support the current...
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Examples on Using Wikidata to Support Nanoinformatics Projects
13 Sep 2019 | Presentations | Contributor(s): Egon Willighagen
Nano WG Meeting September 12, 2019 Two years ago, a community survey resulted in a sketch of a linked data approach to nanosafety research [0]. Interoperability of linked data enables the reuse, but linking databases is not trivial. Many resources are simply not FAIR enough for reuse yet,...
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Experimental Information Extraction from Nanocrystal Device Development Research Papers
24 Jun 2016 | Presentations | Contributor(s): Thaer Dieb
Nano WG weekly meeting: Dr. Thaer M. Dieb, National Institute for Material Science, Graduate School of Frontier Sciences, University of Tokyo Seminar on development of an annotated corpus for nanocrystal device research papers and automatic information extraction framework...
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Extending 3D Slicer to support ground truth pathology tissue segmentation data for integrated pathology/radiology image analysis competitions.
06 Jan 2017 | Presentations | Contributor(s): Joel Haskin Saltz, Andrey Fedorov, Jayashree Kalpathy-Cramer
ITCR PI Monthly Meeting January 6, 2017 Collaborative project goal: Improve support in 3D Slicer for pathology imaging, generate high quality, well curated “ground truth” annotations, integrate key aspects of the Stony Brook ITCR project (FeatureDB) into the MGH project and...
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FAIR for NanoSafety: where do we stand?
05 Apr 2019 | Presentations | Contributor(s): Egon Willighagen
Nano WG April 4, 2019 Findable, Accessible, Interoperable, Reusable (FAIR) sharing of nanosafety data.
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GenomeSpace Presentation
08 Feb 2016 | Presentations | Contributor(s): Michael Reich
GenomeSpace (http://www.genomespace.org) is a cloud-based, cooperative community resource that currently supports the streamlined interaction of 20 bioinformatics tools and data resources. To facilitate integrative analysis by non-programmers, it offers a growing set of 'recipes',...
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Global Harmonization of Nanoinformatics: A Case Study in Convergence and Team Science
27 Nov 2019 | Presentations | Contributor(s): Frederick C. Klaessig, Christine Ogilvie Hendren
Nano WG November 14, 2019National Nanotechnology Coordination Office (NNCO) sponsored Nanoinformatics presentation followed by discussion on Nanomaterial safety data integration with eNanoMapper database and eNanoMapper Ontology...
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Hunting for Opportunities: Nano-Enabled Drug Delivery to Treat Cancers
26 May 2016 | Presentations | Contributor(s): Alan Porter, Mervi Heiskanen
Within the scope of ongoing nano informatics by our Georgia Tech group, we have analyzed Nano-Enabled Drug Delivery (NEDD) research publication and patent activity. Here, I report on work led by Jing Ma exploring A) which nano components are helping deliver which B) drugs, to treat...
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Improving emerging technologies content on Wikipedia, or, what to do when someone is wrong on the Internet
07 Dec 2018 | Presentations | Contributor(s): John P. Sadowski
Nano WG December 6, 2018As one of the first places many people look up information on health and safety, including with emerging technologies like nanotechnology, it is important for Wikipedia to contain information that is complete, up to date, and free of errors. Since 2012, NIOSH has...
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InChl and Nanoparticles
21 Apr 2016 | Presentations | Contributor(s): Steve Heller
The InChI Trust is a nonprofit charity which works to develop and promote the use of the IUPAC InChI open-source chemical structure representation algorithm. The InChI with its associated InChIKey was developed as a non-proprietary international standard to represent chemical structures and has...
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Informatics to enable Routine Personalized Cancer Therapy (IPCT)
18 Feb 2014 | Presentations | Contributor(s): Elmer V. Bernstam, Funda Meric-Bernstam
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Informatics Tools for High-throughput Analysis of Cancer Mutations
15 Jan 2014 | Presentations | Contributor(s): Michael C Ryan, Rachel Karchin
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Innovative Nanoinformatics models and tools: towards a Solid, verified and Integrated Approach to Predictive (eco)Toxicology (NanoSolveIT)
04 Feb 2019 | Presentations | Contributor(s): Antreas Afantitis
Nano WG January 17, 2019NanoSolveIT (a new H2020 nanoinformatics project) aspires to introduce a ground-breaking in silico Integrated Approach to Testing and Assessment (IATA) for the environmental health and safety of Nanomaterials (NM), implemented through a decision support system packaged...
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Innovative Nanoinformatics models and tools: towards a Solid, verified and Integrated Approach to Predictive (eco)Toxicology (NanoSolveIT)
04 Feb 2019 | Presentations | Contributor(s): Antreas Afantitis
Nano WG January 17, 2019NanoSolveIT (a new H2020 nanoinformatics project) aspires to introduce a ground-breaking in silico Integrated Approach to Testing and Assessment (IATA) for the environmental health and safety of Nanomaterials (NM), implemented through a decision support system packaged...
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Introduction to OpenRiskNet and NanoCommons projects
13 Mar 2018 | Presentations | Contributor(s): Thomas Exner
Nano WG Presentation March 8, 2018OpenRiskNet is a 3 year project (Dec 2016 - Nov 2019) with the main objective to develop an opene-Infrastructure providing resources and services to a variety of communities requiring risk assessment,including chemicals, cosmetic ingredients,...
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Introduction to the Trinity Cancer Transcriptome Analysis Toolkit
05 Feb 2015 | Teaching Materials | Contributor(s): Brian Haas, Aviv Regev, Bill Barnett
This short video provides an overview of our ITCR-funded effort to leverage RNA-Seq and de novo transcriptome assembly to assist researchers in studying cancer transcriptomes. Visit our NCGAS Trinity/Galaxy portal to access these compute...
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ISA-TAB-Nano 1.3 release review
09 Mar 2020 | Presentations | Contributor(s): Mervi Heiskanen, Mervi Anneli Heiskanen
Nano WG January 30th, 2020Review of the new 1.3 release with the Nano WG