Introduction to the Trinity Cancer Transcriptome Analysis Toolkit

05 Feb 2015 | Contributor(s): Brian Haas, Aviv Regev, Bill Barnett

This short video provides an overview of our ITCR-funded effort to leverage RNA-Seq and de novo transcriptome assembly to assist researchers in studying cancer transcriptomes.  Visit our NCGAS Trinity/Galaxy portal to access these compute...

Jaqpot - An open-source web platform for creating, using, testing and sharing predictive models in nano-informatics

20 Jun 2019 | Contributor(s): Haralambos Sarimveis

Nano WG June 20, 2019Computational models that predict physicochemical properties, biokinetics or adverse biological effects of Engineered Nanomaterials (ENMs) are becoming increasingly important to support risk assessment and safety-by-design. This is primarily due to cost-saving and...

Materials Science Data Management Initiatives at NIST

17 Dec 2015 | Presentations | Contributor(s): Robert J. Hanisch

Nano WG December 17, 2015   •NIST is a national and world resource for fundamental data •Access should be easy and open –With regard to IP and privacy issues •As our nation’s standards organization… –NIST should be a leader in national and...

Molecule & Particle Differentiation Using Electrophoresis

28 Apr 2015 | Presentations | Contributor(s): Frederick C. Klaessig, Sharon Ku

Nano WG April 16, 2015

Multiclass cancer diagnosis using tumor gene expression signatures

10 Nov 2014 | Downloads

Experiment Description:    The optimal treatment of patients with cancer depends on establishing accurate diagnoses by using a complex combination of clinical and histopathological data. In some instances, this task is difficult or impossible because of atypical clinical...

Nano a Nature Research Solution

20 Apr 2018 | Presentations | Contributor(s): Prathik Roy, Mervi Heiskanen

Nano.nature.com known as Nano is a non-journal type product under the Nature Research portfolio. It aims to provide highly indexed and structured information related to nanomaterials derived from peer-reviewed journals. These include composition, synthesis, properties, characterization methods...

Nano WG: Nanoinformatics Roadmap 2020 Update

03 Nov 2016 | Presentations | Contributor(s): Andrea Haas, Frederick C. Klaessig

Nano WG weekly meeting November 3, 2016.Update on the Nanoinformatics 2020 Roadmap Activities by Andrea Haas and Fred Klaessig. 

Nano, - A Nature Research Solution

27 Feb 2017 | Presentations | Contributor(s): Prathik Roy

Nano.nature.com known as Nano is a non-journal type product under the Nature Research portfolio. It aims to provide highly indexed and structured information related to nanomaterials derived from peer-reviewed journals. These include composition, synthesis, properties, characterization methods...

NANOANALYTICS OF EXTRACELLULAR VESICLES – Standards for isolation, characterization and reporting

26 May 2017 | Presentations | Contributor(s): Shivani Sharma

Nano WG presentation on May 25, 2017. Presentation by Dr.  Shivani Sharma, Associate Director of the Nano Pico Characterization Lab, UCLA. Nanoscale characterization of exosomes and their use disease biomarkers and drug delivery agents

Nanoinformatics and the nanomaterial research community: Strategies for Sharing and Convergence

29 Mar 2018 | Presentations | Contributor(s): Christine Ogilvie Hendren, Mervi Heiskanen

Nano WG Presentation March 27, 2018 Christine Ogilvie Hendren, Jaleesa Amos (CEINT) Camille de Garidel-Thoron (Serenade) Claus Svendsen, Tassos Papadiamantis (NanoFASE) Iseult Lynch, Marianne Matzke (NanoCommons)

NanoInformatics Knowledge Commons Curation Team: Building the Data Dictionary to Enrich Data Curation

11 Jul 2018 | Presentations | Contributor(s): Jaleesia Amos, Yuan Tian, Mervi Heiskanen

Nano WG Presentation, May 31st, 2018 Organized storing of data using informed-decision making to determine what information should be curated, when data curation is complete, and how to identify high-quality data. Purpose of NIKC structure & curation process: tell the story of...

NanoInformatics Knowledge Commons US-EU Data Integration Team: A Collaborative Approach to Building Rich Datasets

14 Feb 2018 | Presentations | Contributor(s): Jaleesia Amos, Camille de Garidel-Thoron, Tassos Papadiamantis, Mervi Heiskanen

Nano WG Presentation February 8, 2018CEINT, NanoFase, CEREGE: Creating interoperability through data curation

Nanoinformatics Roadmap and Modeling

13 Mar 2018 | Presentations | Contributor(s): Frederick C. Klaessig

Nano WG March 1, 2018 by Fread Klaessig:US EU Roadmap StatusDefinition of DatabaseTreatment of materials modeling and QSARs

Nanoinformatics Workshop 2015

23 Mar 2015 | Presentations | Contributor(s): Mark Tuominen, Mervi Heiskanen

Nano WG March 19, 2015.

Nanoinformatics: research and education

17 Jun 2016 | Presentations | Contributor(s): Victor Maojo

Nano WG June 2, 2016.  Text mining of nanotoxicity literature (Victor Maojo)  

Nanomaterial Registry Update

22 Oct 2015 | Presentations | Contributor(s): Karmann Mills, Anthony Hickey, Alexander Tropsha

Nano WG weekly meeting October 22,2015

Nanomaterial-Biological Interactions Knowledgebase

21 Jan 2016 | Presentations | Contributor(s): Stacey L Harper

Nano WG January 14, 2016 The NBI Knowledgebase is intended to offer industry, academia, the general public, and regulatory agencies a mechanism to rationally inquire for unbiased interpretation of nanomaterial exposure effects in biological systems. The knowledgebase serves as a repository for...

NCIP Hub QIN Workshop - March 3, 2015

19 Mar 2015 | Presentations | Contributor(s): Michael McLennan

Mike McLennan, director of HUBzero, presented an overview of basic NCIP Hub functionality to the QIN group on March 3, 2015. The presentation included an overview of the "hub" and HUBzero, and touched upon functionality such as projects, groups, resources and information sharing. The...