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Summarization of Big Data
07 Nov 2014 | Contributor(s): Jeffrey A. Blimes
All about assay selection...
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Support Access to NPO's Structure and Content
13 Aug 2015 | Contributor(s): Michael Halper, Vladimir Ventura, Yehoshua Perl
•Abstraction Networks (“AbNs”) for Ontologies•Two example AbNs:–Area taxonomy–Partial-area taxonomy•BLUOWL: taxonomy-based software tool•Application to the NPO•Conclusions
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Text Messaging and Phone Calls as Tools to Promote Healthy Behaviors among Hispanic Populations
24 Nov 2015 | Teaching Materials | Contributor(s): Laura Leticia Nervi, Barbara Damron, Maria Otero, Andrew Sussman, Dolores Guest
Title: Text Messaging and Phone Calls as Tools to Promote Healthy Behaviors among Hispanic Populations Objectives: The primary aim of this project was to evaluate the use of text messaging and phone calls to motivate Hispanic adult males and females to increase their daily physical...
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Text Messaging as a Method to Increase Oral Chemotherapy Adherence in Hispanic Cancer Populations
23 Nov 2015 | Teaching Materials | Contributor(s): Laura Leticia Nervi, Barbara Damron, Andrew Sussman, Dolores Guest
Title: Text Messaging as a Method to Increase Oral Chemotherapy Adherence in Hispanic Cancer Populations: Patient and Provider Feasibility Surveys Objectives: The purpose of this study was to explore the feasibility of conducting an interventional study to evaluate the effectiveness of text...
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Text Mining, Data Mining and Molecular Dynamics Simulations for in Silico Design of PAMAM Dendrimers
17 Jun 2016 | Presentations | Contributor(s): Julio Facelli
Nano WG June 16, 2016 Text Mining, Data Mining and Molecular Dynamics Simulations for in Silico Design of PAMAM Dendrimers by Julio Facelli
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The Boston Medical Center Patient Navigation Toolkit
22 Dec 2015 | Downloads
The BMC Toolkit offers case studies, tools and resources from cancer care navigation that can be applied to reduce the impact of the target disease, health disparities, and barriers to care unique to your own community. For Program Planners, Volume 1: Developing your Patient Navigation...
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The Cistrome Data Collection
22 Jan 2014 | Presentations
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The Digital Slide Archive
13 Jun 2017 | Presentations | Contributor(s): David A Gutman, Lee Cooper
Presentation at the 2017 Informatics Technology for Cancer Research Annual Meeting Advanced development of an open-source platform for web-based integrative digital image analysis in cancer.
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The history of chemical information and the materials of the future
25 Apr 2019 | Presentations | Contributor(s): Evan Hepler-Smith
Techniques, technologies, cultures, and infrastructures of information management played a central role in the development of the modern chemical sciences and the global chemicals industry since the late 19th century. Chemical databases and analytical techniques that privileged abstract,...
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The impact of engineered nanomaterials on aquatic species: ISA-TAB compatible dataset mined from literature (2007-2016)
13 Jun 2017 | Presentations | Contributor(s): Anastasios Papadiamantis
Nano WG presentation, June 8, 2017Primary scope of the project was to: Model the toxicity of engineered nanomaterials (ENMs) at multiple levels and design and create a database (DB) containing extracted peer-reviewed published toxicity dataAnalyse the extracted data and identify...
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The NANoREG Toolbox for the safety assessment of nanomaterials
16 Jan 2018 | Presentations | Contributor(s): Paula Jantunen
Presentation for the Nano WG on January 11, 2018 by Paula Jantunen, The European Commission’s science and knowledge service Joint Research Centre NANOoREG Toolbox supports the framework by identifying & inventorying tools for the different steps and options of...
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The Open Scholarship Initiative (OSI)
17 Dec 2015 | Presentations | Contributor(s): Glenn Hampson
Nano WG meeting November 19, 2015. : "What should the future of scholarly publishing look like? How about open access? Who should decide? Can journals become more affordable and accessible? Will journals continue to serve as the primary means of communicating research? Can institutional...
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Tools for Creation of Integrated Data Repository for Cancer Research
16 Jun 2015 | Presentations | Contributor(s): Guoqian Jiang
Admin Supplement Proposal Parent Projects: DeepPhe (PIs: Savova and Jacobson) caCDE-QA (PI: Jiang)
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Tools to Analyze Morphology and Spatially Mapped Molecular Data
03 Oct 2014 | Presentations | Contributor(s): Joel Saltz
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Transitioning to Predictive Analysis for Nanoparticle Biocorona Studies
14 May 2019 | Presentations | Contributor(s): Korin Wheeler
Nano WG April 18, 2019: Proteins adsorbed to nanomaterials in a biological environment mediate cellular recognition, uptake, and toxicity of nanomaterials. Here, Dr. Korin Wheeler presents the development of experimental methods to characterize this population of proteins (also...
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Trinity: RNA-Seq De novo Assembly Application
30 Jun 2015 | External Applications | Contributor(s): Grabherr MG, Brian Haas, Yassour M, Levin JZ, Thompson DA, Amit I, Adiconis X, Fan L, Raychowdhury R, Zeng Q, Chen Z, Mauceli E, Hacohen N, Gnirke A, Rhind N, Di Palma F, Birren BW, Nusbaum C, Lindblad-toh K, Friedman N, Regev A
Quick Guide for the ImpatientTrinity assembles transcript sequences from Illumina RNA-Seq data.Download Trinity here.Build Trinity by typing make : ; in the base installation directory.Assemble RNA-Seq data like so:Trinity --seqType fq --left reads_1.fq --right reads_2.fq...
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Understanding Colorectal Cancer to Protect our Communities
24 Nov 2015 | Teaching Materials | Contributor(s): NCI
This is a teaching material originally developed by NCI.
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US-EU Nanoinformatics Roadmap Update
27 Jul 2016 | Presentations | Contributor(s): Frederick C. Klaessig
US-EU Nanoinformatics Roadmap Update for the Nano WG on July 28, 2016
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Why in the world do we need a nanomaterials description system – How CODATA and VAMAS answers that question
12 Mar 2015 | Presentations | Contributor(s): John Rumble
Nano WG March12, 2015