2014 QIN Abstract Book
18 Apr 2014 | Publications | Contributor(s): Larry Clark
The QIN Face-to-Face Meeting Presentations Posters and Abstracts.
2014 QIN Face to Face Meeting
18 Apr 2014 | Workshops | Contributor(s): Jayashree Kalpathy-Cramer, Laurence Clarke
The Quantitative Imaging Network (QIN) grows from the NCI program announcement "Quantitative Imaging for Evaluation of Responses to Cancer Therapies". The network is designed to promote research and development of quantitative imaging methods for the measurement of tumor response to therapies in...
A Brief History of OpenTox
25 Jun 2015 | Presentations | Contributor(s): Barry Hardy
Nano WG June 25, 2015 The history and challenges of OpenTox developments and the potential of its community, framework and principles applied to advancing safety assessment goals.
An ISA-TAB Nano compliant data management system for nanosafety modelling
10 Sep 2014 | Presentations | Contributor(s): Robert Rallo
Dr. Robert RalloAssociate Professor , Universitat Rovira i Virgili, Departament d'Enginyeria Informàtica i MatemàtiquesTarragona, SpainNano WG presentation July 10, 2014[[Image(<Capture.PNG>)]]
ASTM update: minimun ontology proposal
01 Dec 2016 | Presentations | Contributor(s): Frederick C. Klaessig
Nano WG Meeting December 1, 2016. • Review of interac+ons between ASTM and Nanoinforma+cs Roadmaps • Status of ASTM ‘minimum ontology’ proposal • Discussion of best means of iden+fying a “neutral, core, basic, minimum” ontology that is...
Baylor Residual breast cancer
13 Nov 2014 | Downloads | Contributor(s): Creighton C, Lewis M, Chang J, Jonathan Bistline
Residual breast cancers after conventional therapy display mesenchymal as tumor-initiating features. There are four (4) files included in this study: Sample Annotation (combined_sample_annotation.txt) Gene expression data from CD44+/CD24- cells sorted by flow cytometry (GSE7513.gct) Human...
Bioinformatics/IT and Data Sharing Working Group Update
21 Apr 2014 | Presentations | Contributor(s): Brad Erickson, Tom Casavant, John Freymann, Vyshak Chandra
Bioinformatics/IT and Data Sharing Working Group Update
Breast Cancer Crossword
20 Nov 2015 | Teaching Materials | Contributor(s): Katelyn Schifano
This crossword is designed for use in social media as well as patient waiting areas.
05 Jul 2017 | Presentations | Contributor(s): Stephanie Morris, Mervi Heiskanen
General Overview of the caNanoLab data portal: data submission workflow, collaboration features, data sharing and working with Journals and PubMed to share information about data submissions.
caNanoLab: data sharing to expedite the use of nanotechnology in biomedicine
13 Dec 2013 | Publications | Contributor(s): Sharon Gaheen, George W Hinkal, Stephanie A Morris, Michal Lijowski, Mervi Heiskanen, Juli Klemm
The use of nanotechnology in biomedicine involves the engineering of nanomaterials to act as therapeutic carriers, targeting agents and diagnostic imaging devices. The application of nanotechnology in cancer aims to transform early detection, targeted therapeutics and cancer prevention and...
CERR: A Computational Environment for Radiotherapy Research
28 Oct 2014 | External Applications | Contributor(s): Joseph Deasy
CERR (pronounced 'sir') is a software platform for developing and sharing research results in radiation therapy treatment planning.CERR is written in the widely-used Matlab language (version 7.0 or later), allowing for low-cost development of visualization and analysis tools.CERR will...
Clinical Trials Design, Development, and Outreach Working Group
21 Apr 2014 | Presentations | Contributor(s): Richard Wahl, John Buatti, Vyshak Chandra
Clinical Trials Design, Development, and Outreach Working Group Update
Community Adoption & Adaptation of ISA-TAB-nano Data Sharing Templates: A brief overview, next steps at CEINT, and an open discussion of priority actions
09 Feb 2017 | Presentations | Contributor(s): Christine Ogilvie Hendren, Nancy Birkner
Nano WG meeting on February 2nd, 2017 ISA-TAB-Nano Next Steps
CRAVAT Introduction Video - Cancer Related Analysis of Variants
03 Dec 2014 | Teaching Materials | Contributor(s): Michael C Ryan
This video provides a brief overview of the CRAVAT web service(http://www.cravat.us/). CRAVAT provides annotation and analysis of cancer mutations. CRAVAT is free, very easy to use, and can handle large volumes of mutations.[[Youtube(xovmIy11Bcs)]]Please switch to 1080 resolution and watch...
Data Acquisition Working Group
21 Apr 2014 | Presentations | Contributor(s): Tom Chenevert, Paul Kinahan
DA-WG Update on PET-CT and DWI MRI
Data Collection from the Nanotoxicology Literature Using ISA-TAB-Nano
21 Jan 2016 | Presentations | Contributor(s): Richard Liam Marchese Robinson
Nano WG meeting January 21, 2016 This is an updated version of the talk originally delivered at the CompNanoTox2015 conference.  Marchese Robinson, R.; Richarz, A.N.; Cassano, A.; Cronin, M.T.D; Rallo, R. (2015): Data Collection from the Nanotoxicology Literature Using ISA-TAB-Nano. FigShare....
Data Management: The appproach in NANoREG and ProSafe
21 Apr 2016 | Presentations | Contributor(s): Sara Totaro, Hugues Crutzen
NANoREG project is working on establishing a common European approach to the regulatory testing of Manufactured Nanomaterials and ProSafe has been designed to coordinate and support the aims of EU member and associated states in their EU and international efforts regarding risk assessment,...
Data ReproducibilityNanotechnology Knowledge Infrastructure Data Curation
05 Dec 2014 | Presentations | Contributor(s): Martin Fritts
Nano WG presentation on December 4, 2014
Data Sharing and the Electronic NanoBook (eNanobook)
20 Nov 2017 | Presentations | Contributor(s): Alexander Tropsha, Fred Prior
Sustainable research progress in many if not all scientific disciplines critically depends on the existence of robust specialized databases that integrate and structure all available experimental information in the respective fields. The need for such reference databases is especially critical...
Data, Metadata and "Data Quality" for Databases
05 Dec 2014 | Presentations | Contributor(s): Frederick C. Klaessig, Mervi Heiskanen
Nano WG December 4, 2014