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  1. CWIG_Nov08th2020_PathOS_Recording

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    04 Nov 2020

  2. CWIG_Oct09th2020_Tibanna_SooLee_Recording

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    04 Nov 2020

  3. CWIG_OCT11th2020_JohannesKoster-Recording

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    04 Nov 2020

  4. CWIG_Oct152019_PDCIntegrationSBG_Slides

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    04 Nov 2020

  5. CWIG_Sept11th2020_Avi Ma'ayan_Recording

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    04 Nov 2020

  6. CWIG_Sept13th2019_McKerrow_IntegratingMultiOmics_Slides

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    04 Nov 2020

  7. CWIG_Sept13th2019_SBG_Recording

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    04 Nov 2020

  8. ITCR Monthly Teleconference September 4, 2015

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    07 Oct 2015 | Contributor(s): Juli Klemm

     

  9. Next-Generation Clustered Heat Maps (NG-­CHM)

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    07 Oct 2015 | Contributor(s): Weinstein John, Bradley Broom

    Clustered Heat Maps (CHMs) have been referred to as the ubiquitous visual icons of post-genomic biology -- the most frequent type of visualization for large molecular profiling databases. However, “traditional” CHMs are static images -- a serious limitation. Accordingly, we have now...

  10. October 2021 CWIG Webinar Slides - Arun Isaac

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    27 Dec 2021 | Contributor(s): Alan Zheng

  11. October 2021 CWIG Webinar Slides - Pjotr Prins

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    27 Dec 2021 | Contributor(s): Alan Zheng

  12. Open source diffusion MRI technology for brain cancer research

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    07 Oct 2015 | Contributor(s): Lauren O\'Donnell

    Using measurements of water diffusion, dMRI can give unique insights into the microstructure and cellular orientation of tissues. There is a growing awareness in the neurosurgery community that diffusion models must move beyond the current clinical standard of the diffusion tensor for better...

  13. Pathology Image Informatics Platform for visualization, analysis and management

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    07 Oct 2015 | Contributor(s): Metin Gurcan, Anant Madabhushi, Anne Martel

    This multi-institutional proposal seeks to expand on an existing, freely available pathology image viewer (Sedeen Image Viewer) to create a pathology informatics platform (PIIP) for managing, annotating, sharing, and quantitatively analyzing digital Pathology Imaging (DPI) data. Sedeen has become...

  14. September 2021 CWIG Webinar Slides - Junjun Zhang

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    27 Dec 2021 | Contributor(s): Alan Zheng

  15. Seven Bridges Cancer Genomics Cloud Pilot TCGA 2015 symposium workshop presentation

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    23 May 2015 | Presentations | Contributor(s): Deniz Kural

    Basic and translational cancer research creates the need to disseminate, manage, and interpret large heterogeneous datasets. The volume and complexity of the data now routinely generated by high-throughput technologies has become too costly for individual laboratories and many research...

  16. The Cancer Genomics Cloud powered by Seven Bridges: a secure and scalable cloud-based platform to access, share and analyze multi-omics datasets

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    18 May 2021 | Presentations

    The Cancer Genomics Cloud powered by Seven Bridges (CGC) is a NCI-funded cloud resource that provides a unified platform for cancer data analysis by co-localizing three components within the cloud: 1) large cancer datasets including TCGA, CPTAC and several others from CRDC data nodes; 2) >500...

  17. UCSC Biomedical Evidence Graph Demonstration

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    03 Jun 2015 | Presentations | Contributor(s): Josh Stuart, ellrott

    The BMEG demonstration includes the following elements: 1) Organization of crowd-source challenges to develop best-of-breed methods including an overview of current DREAM projects, living benchmarks; 2) Enabling cloud-ready methods for mass compute with examples of recently...

  18. Video: Learn how TIES can help manage research resources

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    16 Jan 2015 | Presentations | Contributor(s): Girish Chavan, Rebecca Crowley

    https://www.youtube.com/watch?v=EzjAo9LJ4tg